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MiniPCR Chopped! CRISPR Activity - Instructor Guide

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miniPCR bio TM Chopped! Using CRISPR/Cas9 to cut DNA - Student's Guide Version: 1.0 - Release: May 2022 - © 2022 by miniPCR bio™ Student's Guide P./35 4. Fill out the table below to compare your predictions from the pre-lab activity to your experimental observations. • Under the "Predicted DNA fragment size(s)" column, copy down your predicted fragment size(s) from the table in the pre-lab questions (page 29). • Under "Observed DNA fragment size(s)", write down the observed fragment size(s) from the reaction (refer to your gel image or sketch from question 1 on page 34). Critical thinking 1. Tube A and Tube B are included in this experiment as controls. Explain the role that each control plays in this experiment. a. Tube A: b. Tube B: 2. Assume you set up a tube that contained a gRNA and the DNA sample, but no Cas9 nuclease. Would you expect the DNA sample to be cut? Justify your response. gRNA used Predicted DNA fragment size(s) Observed DNA fragment size(s) Tube A None Tube B None Tube C gRNA1 Tube D gRNA2

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