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MiniPCR Molecular Rainbow Activity - Instructor Guide

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miniPCR bio TM Dye Electrophoresis Lab: Molecular Rainbow - Instructor's and Student's Guide Version: 1.0 - Release: April 2022 - © 2022 by miniPCR bio™ Student's Guide P./10 When scientists discuss molecules separating in a gel, they talk about bands moving in lanes. Let's take a closer look at what these two terms mean. Green Green Blue Purple Red Lane 2 Lane 3 Lane 4 Lane Charged molecules that are put in a well will move towards the electrode that has an opposite charge. As they move through the gel, they travel in a straight line. Like runners on a track, when we talk about the molecules moving through a gel, we talk about them moving in lanes. There are usually billions of molecules in each well of the gel. As the molecules move towards an electrode with the opposite charge, all of the molecules that have the same charge and size will move through the gel in the same direction and at the same speed. This group of molecules moving together will stay in about the same shape as the well they started in. When you look at the gel, the group of molecules will look like a small horizontal line on the gel. We call these lines bands. In Lane 4, there are two bands: a red band made of billions of red molecules and a purple band made of billions of purple molecules. Both of these bands started in the well in Lane 4, but as the molecules moved through the gel the two bands separated because the red and purple molecules are different sizes and traveled through the gel at different speeds. Bands Review - 1. What causes molecules to move through the gel during gel electrophoresis? 2. What role does the gel play in gel electrophoresis? 1 2

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